Journal of Resources and Ecology ›› 2020, Vol. 11 ›› Issue (5): 466-474.DOI: 10.5814/j.issn.1674-764x.2020.05.004
• Forest Ecosystem • Previous Articles Next Articles
WANG Yang, YUE Dan*(), LI Xinzhi*(
)
Received:
2020-02-19
Accepted:
2020-06-03
Online:
2020-09-30
Published:
2020-09-30
Contact:
YUE Dan,LI Xinzhi
Supported by:
WANG Yang, YUE Dan, LI Xinzhi. Genetic Diversity of Toona ciliata Populations based on SSR Markers[J]. Journal of Resources and Ecology, 2020, 11(5): 466-474.
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URL: http://www.jorae.cn/EN/10.5814/j.issn.1674-764x.2020.05.004
Population | Location | East longitude | North latitude | Altitude (m) | Population | Location | East longitude | North latitude | Altitude (m) |
---|---|---|---|---|---|---|---|---|---|
P1 | Xingyi of Guizhou | 105°02°08? | 24°58°03? | 779 | P13 | Laifeng of Hubei | 109°15°57? | 29°25°58? | 521 |
P2 | Changde of Hunan | 111°31°08? | 29°18°54? | 399 | P14 | Hefeng of Hubei | 110o12°29? | 30o10°12? | 559 |
P3 | Ceheng of Guizhou | 105°52°38? | 24°52°16? | 972 | P15 | Enshi of Hubei | 109°14°51? | 30°01°13? | 738 |
P4 | Tianlin of Guangxi | 106°39°08? | 24°02°12? | 311 | P16 | Xuan’en of Hubei | 109°41°59? | 30o02°26? | 1013 |
P5 | Shaoyang of Hunan | 111°22°15? | 27°22°30? | 540 | P17 | Lichuan of Hubei | 108°33°49? | 29°51°22? | 521 |
P6 | Jinggangshan of Jiangxi | 114°09°37? | 26°39°20? | 907 | P18 | Zhushan of Hubei | 110°01°59? | 31°39°58? | 660 |
P7 | Zhenfeng of Guizhou | 105°46°17? | 25°22°46? | 477 | P19 | Gucheng of Hubei | 111°15°49? | 32°01°36? | 402 |
P8 | Huaihua of Hunan | 110°05°14? | 27°31°47? | 613 | P20 | Badong of Hubei | 110°23°44? | 30°36°49? | 720 |
P9 | Anlong of Guizhou | 105°26°25? | 25°06°23? | 1377 | P21 | Chongyang of Hubei | 113°46°25? | 29°26°37? | 338 |
P10 | Youmai of Guizhou | 105°59°41? | 25°03°19? | 695 | P22 | Tongshan of Hubei | 114°38°39? | 29°24°18? | 567 |
P11 | Xian°an of Hubei | 114°19°18? | 29°45°42? | 356 | P23 | Huangshi of Hubei | 115°04°51? | 30°11°26? | 356 |
P12 | Xianfeng of Hubei | 109°00°07? | 29°47°59? | 806 | P24 | Jianshi of Hubei | 110°05°59? | 30°19°26? | 541 |
Table 1 Locations and altitudes of the 24 sampled populations of Toona ciliata
Population | Location | East longitude | North latitude | Altitude (m) | Population | Location | East longitude | North latitude | Altitude (m) |
---|---|---|---|---|---|---|---|---|---|
P1 | Xingyi of Guizhou | 105°02°08? | 24°58°03? | 779 | P13 | Laifeng of Hubei | 109°15°57? | 29°25°58? | 521 |
P2 | Changde of Hunan | 111°31°08? | 29°18°54? | 399 | P14 | Hefeng of Hubei | 110o12°29? | 30o10°12? | 559 |
P3 | Ceheng of Guizhou | 105°52°38? | 24°52°16? | 972 | P15 | Enshi of Hubei | 109°14°51? | 30°01°13? | 738 |
P4 | Tianlin of Guangxi | 106°39°08? | 24°02°12? | 311 | P16 | Xuan’en of Hubei | 109°41°59? | 30o02°26? | 1013 |
P5 | Shaoyang of Hunan | 111°22°15? | 27°22°30? | 540 | P17 | Lichuan of Hubei | 108°33°49? | 29°51°22? | 521 |
P6 | Jinggangshan of Jiangxi | 114°09°37? | 26°39°20? | 907 | P18 | Zhushan of Hubei | 110°01°59? | 31°39°58? | 660 |
P7 | Zhenfeng of Guizhou | 105°46°17? | 25°22°46? | 477 | P19 | Gucheng of Hubei | 111°15°49? | 32°01°36? | 402 |
P8 | Huaihua of Hunan | 110°05°14? | 27°31°47? | 613 | P20 | Badong of Hubei | 110°23°44? | 30°36°49? | 720 |
P9 | Anlong of Guizhou | 105°26°25? | 25°06°23? | 1377 | P21 | Chongyang of Hubei | 113°46°25? | 29°26°37? | 338 |
P10 | Youmai of Guizhou | 105°59°41? | 25°03°19? | 695 | P22 | Tongshan of Hubei | 114°38°39? | 29°24°18? | 567 |
P11 | Xian°an of Hubei | 114°19°18? | 29°45°42? | 356 | P23 | Huangshi of Hubei | 115°04°51? | 30°11°26? | 356 |
P12 | Xianfeng of Hubei | 109°00°07? | 29°47°59? | 806 | P24 | Jianshi of Hubei | 110°05°59? | 30°19°26? | 541 |
Primer | Primer combination sequences | |
---|---|---|
S5 | F: GTGGCGTAACAGACCAAAAC | R: CCAGAGATACTCCATTCCAG |
S11 | F: AGTAATAGCCTGTAGAGCAG | R: GAAGAAGGGTGAGCGAGA |
S22 | F: GAAACCAGCAGGCAGAGC | R: ACCGCATTAGTACCAGTAG |
T02 | F: TAGGAAAGGCAAGGTGGG | R: GGGTGGTCGATGAGGGTT |
T05 | F: AGTAATAGCCTGTAGAGCAG | R: AGAGTGGGGTGGTCGATGAG |
T07 | F: ATGGATGAGTGTGCGATAGG | R: TGTGATGTAGGAGTCTGAAC |
S422 | F: ATGGATGAGTGTGCGATAGG | R: TGTGATGTAGGAGTCTGAAC |
Table 2 Primer sequences used in the SSR analysis of T. ciliata
Primer | Primer combination sequences | |
---|---|---|
S5 | F: GTGGCGTAACAGACCAAAAC | R: CCAGAGATACTCCATTCCAG |
S11 | F: AGTAATAGCCTGTAGAGCAG | R: GAAGAAGGGTGAGCGAGA |
S22 | F: GAAACCAGCAGGCAGAGC | R: ACCGCATTAGTACCAGTAG |
T02 | F: TAGGAAAGGCAAGGTGGG | R: GGGTGGTCGATGAGGGTT |
T05 | F: AGTAATAGCCTGTAGAGCAG | R: AGAGTGGGGTGGTCGATGAG |
T07 | F: ATGGATGAGTGTGCGATAGG | R: TGTGATGTAGGAGTCTGAAC |
S422 | F: ATGGATGAGTGTGCGATAGG | R: TGTGATGTAGGAGTCTGAAC |
Locus | Na | Ne | PPB (%) | PIC | Ho | He | H | I |
---|---|---|---|---|---|---|---|---|
S5 | 2 | 2.1460 | 89.30 | 0.5340 | 0.0000 | 0.4444 | 0.4401 | 0.6603 |
S11 | 4 | 3.9574 | 75.20 | 0.7473 | 0.0870 | 0.6749 | 0.6675 | 1.2094 |
S22 | 2 | 1.7950 | 86.63 | 0.4429 | 0.0000 | 0.4266 | 0.4228 | 0.6205 |
T02 | 2 | 1.4102 | 93.53 | 0.2909 | 0.5965 | 0.4695 | 0.4654 | 0.1447 |
T07 | 3 | 2.3750 | 63.50 | 0.5789 | 0.0192 | 0.4796 | 0.4750 | 0.8395 |
T05 | 2 | 2.0880 | 93.70 | 0.5211 | 0.0000 | 0.4708 | 0.4664 | 0.6757 |
S422 | 4 | 2.0498 | 49.92 | 0.5122 | 0.0357 | 0.5037 | 0.4992 | 0.9745 |
Mean | 2.7143 | 2.2602 | 78.82 | 0.5182 | 0.1055 | 0.4956 | 0.4909 | 0.7321 |
Table 3 Summary of genetic variation statistics of the seven Loci
Locus | Na | Ne | PPB (%) | PIC | Ho | He | H | I |
---|---|---|---|---|---|---|---|---|
S5 | 2 | 2.1460 | 89.30 | 0.5340 | 0.0000 | 0.4444 | 0.4401 | 0.6603 |
S11 | 4 | 3.9574 | 75.20 | 0.7473 | 0.0870 | 0.6749 | 0.6675 | 1.2094 |
S22 | 2 | 1.7950 | 86.63 | 0.4429 | 0.0000 | 0.4266 | 0.4228 | 0.6205 |
T02 | 2 | 1.4102 | 93.53 | 0.2909 | 0.5965 | 0.4695 | 0.4654 | 0.1447 |
T07 | 3 | 2.3750 | 63.50 | 0.5789 | 0.0192 | 0.4796 | 0.4750 | 0.8395 |
T05 | 2 | 2.0880 | 93.70 | 0.5211 | 0.0000 | 0.4708 | 0.4664 | 0.6757 |
S422 | 4 | 2.0498 | 49.92 | 0.5122 | 0.0357 | 0.5037 | 0.4992 | 0.9745 |
Mean | 2.7143 | 2.2602 | 78.82 | 0.5182 | 0.1055 | 0.4956 | 0.4909 | 0.7321 |
Population | Na | Ne | PIC | Ho | He | H | I |
---|---|---|---|---|---|---|---|
P1 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P2 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P3 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P4 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P5 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P6 | 2.2857 | 1.8138 | 100.00% | 0.0714 | 0.4481 | 0.4107 | 0.6533 |
P7 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.0952 | 0.0714 | 0.0990 |
P8 | 1.2857 | 1.1829 | 28.57% | 0.0357 | 0.1310 | 0.1027 | 0.1528 |
P9 | 1.1667 | 1.1000 | 14.29% | 0.0833 | 0.0714 | 0.0625 | 0.0937 |
P10 | 1.2857 | 1.2101 | 28.57% | 0.0857 | 0.1302 | 0.1171 | 0.1705 |
P11 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P12 | 1.1429 | 1.1213 | 14.29% | 0.1020 | 0.0706 | 0.0656 | 0.0931 |
P13 | 1.4286 | 1.2527 | 42.86% | 0.2381 | 0.1810 | 0.1508 | 0.2278 |
P14 | 1.0000 | 1.0000 | 0.00% | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
P15 | 1.2857 | 1.2857 | 28.57% | 0.2857 | 0.2857 | 0.1429 | 0.1980 |
P16 | 2.4286 | 2.2286 | 0.00% | 0.1429 | 0.6190 | 0.5159 | 0.8015 |
P17 | 1.0000 | 1.0000 | 0.00% | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
P18 | 1.1429 | 1.1143 | 14.29% | 0.0952 | 0.0762 | 0.0635 | 0.0909 |
P19 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P20 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P21 | 1.0000 | 1.0000 | 0.00% | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
P22 | 1.2857 | 1.1708 | 28.57% | 0.0857 | 0.1175 | 0.1057 | 0.1588 |
P23 | 1.1429 | 1.0857 | 14.29% | 0.0714 | 0.0714 | 0.0536 | 0.0803 |
P24 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
Mean | 1.2629 | 1.2081 | 19.05% | 0.1136 | 0.1493 | 0.1044 | 0.1546 |
Table 4 Genetic diversity parameters of 24 T. ciliata populations
Population | Na | Ne | PIC | Ho | He | H | I |
---|---|---|---|---|---|---|---|
P1 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P2 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P3 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P4 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P5 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P6 | 2.2857 | 1.8138 | 100.00% | 0.0714 | 0.4481 | 0.4107 | 0.6533 |
P7 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.0952 | 0.0714 | 0.0990 |
P8 | 1.2857 | 1.1829 | 28.57% | 0.0357 | 0.1310 | 0.1027 | 0.1528 |
P9 | 1.1667 | 1.1000 | 14.29% | 0.0833 | 0.0714 | 0.0625 | 0.0937 |
P10 | 1.2857 | 1.2101 | 28.57% | 0.0857 | 0.1302 | 0.1171 | 0.1705 |
P11 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P12 | 1.1429 | 1.1213 | 14.29% | 0.1020 | 0.0706 | 0.0656 | 0.0931 |
P13 | 1.4286 | 1.2527 | 42.86% | 0.2381 | 0.1810 | 0.1508 | 0.2278 |
P14 | 1.0000 | 1.0000 | 0.00% | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
P15 | 1.2857 | 1.2857 | 28.57% | 0.2857 | 0.2857 | 0.1429 | 0.1980 |
P16 | 2.4286 | 2.2286 | 0.00% | 0.1429 | 0.6190 | 0.5159 | 0.8015 |
P17 | 1.0000 | 1.0000 | 0.00% | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
P18 | 1.1429 | 1.1143 | 14.29% | 0.0952 | 0.0762 | 0.0635 | 0.0909 |
P19 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P20 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
P21 | 1.0000 | 1.0000 | 0.00% | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
P22 | 1.2857 | 1.1708 | 28.57% | 0.0857 | 0.1175 | 0.1057 | 0.1588 |
P23 | 1.1429 | 1.0857 | 14.29% | 0.0714 | 0.0714 | 0.0536 | 0.0803 |
P24 | 1.1429 | 1.1429 | 14.29% | 0.1429 | 0.1429 | 0.0714 | 0.0990 |
Mean | 1.2629 | 1.2081 | 19.05% | 0.1136 | 0.1493 | 0.1044 | 0.1546 |
Locus | Fis | Fst | Nm |
---|---|---|---|
S5 | 1.0000 | 0.9148 | 0.0233 |
S11 | -0.1232 | 0.8288 | 0.0516 |
S22 | 1.0000 | 0.9148 | 0.0233 |
T02 | -0.7084 | 0.2374 | 0.8029 |
T07 | 0.7857 | 0.8233 | 0.0537 |
T05 | 1.0000 | 0.8921 | 0.0302 |
S422 | 0.6548 | 0.7914 | 0.0659 |
Mean | -0.0096 | 0.7727 | 0.0735 |
Table 5 Coefficients of genetic differentiation and gene flow between T. ciliata populations
Locus | Fis | Fst | Nm |
---|---|---|---|
S5 | 1.0000 | 0.9148 | 0.0233 |
S11 | -0.1232 | 0.8288 | 0.0516 |
S22 | 1.0000 | 0.9148 | 0.0233 |
T02 | -0.7084 | 0.2374 | 0.8029 |
T07 | 0.7857 | 0.8233 | 0.0537 |
T05 | 1.0000 | 0.8921 | 0.0302 |
S422 | 0.6548 | 0.7914 | 0.0659 |
Mean | -0.0096 | 0.7727 | 0.0735 |
Population | P1 | P2 | P3 | P 4 | P5 | P 6 | P7 | P8 | P9 | P10 | P11 | P12 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
P1 | 0.000 | 0.184 | 0.000 | 0.169 | 0.164 | 1.427 | 0.023 | 0.191 | 0.048 | 0.020 | 1.250 | 1.495 |
P2 | 813.899 | 0.000 | 0.502 | 0.284 | 0.224 | 0.000 | 0.253 | 0.136 | 0.321 | 0.355 | 0.151 | 0.397 |
P3 | 94.239 | 745.562 | 0.000 | 0.134 | 0.238 | 1.499 | 0.087 | 0.624 | 0.010 | 0.079 | 1.559 | 0.914 |
P4 | 200.399 | 764.182 | 121.327 | 0.000 | 0.261 | 0.379 | 0.357 | 0.191 | 0.321 | 0.251 | 0.679 | 0.759 |
P5 | 694.831 | 216.008 | 615.055 | 600.545 | 0.000 | 0.128 | 1.861 | 0.076 | 0.321 | 0.251 | 0.151 | 0.397 |
P6 | 942.630 | 394.233 | 854.178 | 809.441 | 288.084 | 0.000 | 0.594 | 0.220 | 1.261 | 1.101 | 0.100 | 0.317 |
P7 | 94.373 | 717.911 | 58.421 | 174.249 | 600.937 | 851.510 | 0.000 | 1.852 | 1.826 | 0.001 | 1.482 | 1.338 |
P8 | 588.999 | 244.576 | 513.711 | 518.222 | 128.105 | 415.348 | 491.837 | 0.000 | 0.273 | 0.250 | 0.150 | 1.033 |
P9 | 51.623 | 764.833 | 51.287 | 170.344 | 643.819 | 890.660 | 46.619 | 536.283 | 0.000 | 0.011 | 1.826 | 1.624 |
P10 | 105.825 | 719.245 | 28.112 | 130.579 | 595.541 | 937.695 | 43.327 | 491.987 | 56.546 | 0.000 | 1.378 | 1.329 |
P11 | 1102.194 | 295.379 | 1031.610 | 1033.003 | 438.119 | 409.258 | 1006.608 | 518.472 | 1051.834 | 1009.778 | 0.000 | 0.092 |
P12 | 667.923 | 249.735 | 627.351 | 679.819 | 354.799 | 614.673 | 584.291 | 273.074 | 628.524 | 603.785 | 518.927 | 0.000 |
P13 | 658.233 | 215.922 | 610.919 | 655.850 | 306.996 | 569.457 | 570.941 | 227.165 | 615.754 | 587.346 | 496.102 | 47.796 |
P14 | 784.345 | 155.414 | 734.238 | 772.719 | 331.558 | 547.032 | 685.329 | 297.541 | 740.855 | 710.735 | 390.338 | 131.978 |
P15 | 702.516 | 233.378 | 660.920 | 711.379 | 351.351 | 608.949 | 618.035 | 288.427 | 662.272 | 637.127 | 491.349 | 34.232 |
P16 | 731.596 | 193.604 | 686.204 | 730.671 | 337.601 | 576.007 | 645.371 | 280.881 | 690.102 | 662.422 | 447.588 | 32.267 |
P17 | 648.599 | 292.523 | 612.780 | 672.126 | 388.540 | 653.713 | 567.327 | 297.783 | 610.703 | 662.329 | 559.069 | 43.109 |
P18 | 896.381 | 298.413 | 859.041 | 911.302 | 494.726 | 686.210 | 814.512 | 460.657 | 858.245 | 835.246 | 435.728 | 231.839 |
P19 | 997.076 | 302.490 | 952.453 | 995.339 | 516.427 | 659.615 | 911.266 | 511.782 | 955.825 | 928.686 | 348.442 | 328.029 |
P20 | 824.102 | 180.008 | 777.377 | 817.424 | 371.063 | 572.418 | 737.151 | 343.091 | 782.254 | 753.221 | 379.222 | 161.860 |
P21 | 1004.299 | 222.903 | 932.128 | 926.337 | 329.956 | 305.026 | 910.554 | 418.748 | 955.163 | 910.704 | 117.445 | 467.081 |
P22 | 1078.720 | 303.619 | 1003.264 | 992.667 | 391.714 | 308.371 | 984.091 | 492.168 | 1028.344 | 982.642 | 108.409 | 548.314 |
P23 | 1154.471 | 357.847 | 1082.811 | 1077.884 | 477.909 | 401.988 | 1060.605 | 569.301 | 1105.364 | 1061.561 | 73.747 | 588.123 |
P24 | 789.9930 | 174.5340 | 742.3150 | 783.321 | 351.456 | 409.226 | 702.080 | 314.612 | 747.541 | 718.582 | 399.826 | 129.477 |
Population | P13 | P14 | P15 | P16 | P17 | P18 | P19 | P20 | P21 | P22 | P23 | P24 |
P1 | 1.321 | 1.320 | 1.411 | 1.550 | 1.398 | 1.254 | 1.283 | 1.279 | 1.264 | 1.260 | 1.339 | 1.269 |
P2 | 0.353 | 0.147 | 0.376 | 0.514 | 0.315 | 0.547 | 0.540 | 0.184 | 0.081 | 0.087 | 0.103 | 0.208 |
P3 | 1.506 | 1.234 | 1.006 | 0.503 | 1.075 | 1.176 | 0.903 | 0.645 | 0.549 | 0.504 | 0.538 | 0.527 |
P4 | 0.671 | 0.484 | 0.515 | 0.565 | 0.372 | 0.461 | 0.460 | 0.349 | 0.266 | 0.345 | 0.342 | 0.582 |
P5 | 1.321 | 0.670 | 0.716 | 0.565 | 0.996 | 0.893 | 0.789 | 0.338 | 0.166 | 0.139 | 0.136 | 0.423 |
P6 | 0.266 | 0.330 | 0.262 | 0.317 | 0.354 | 0.368 | 0.379 | 0.272 | 0.114 | 0.125 | 0.120 | 0.305 |
P7 | 0.172 | 1.322 | 1.322 | 0.249 | 1.349 | 1.338 | 1.337 | 1.337 | 1.349 | 2.305 | 1.340 | 1.337 |
P8 | 0.668 | 0.725 | 0.080 | 0.564 | 0.514 | 0.526 | 0.553 | 0.191 | 0.135 | 0.063 | 0.128 | 0.289 |
P9 | 2.477 | 1.784 | 2.050 | 1.641 | 1.636 | 2.635 | 2.624 | 1.672 | 1.636 | 1.670 | 1.839 | 0.981 |
P10 | 1.299 | 0.935 | 1.314 | 1.719 | 1.866 | 1.329 | 1.328 | 1.328 | 1.866 | 2.285 | 1.331 | 1.328 |
P11 | 0.100 | 0.103 | 0.096 | 0.092 | 0.093 | 0.097 | 0.123 | 0.138 | 0.156 | 0.087 | 0.093 | 0.092 |
P12 | 0.090 | 0.089 | 0.090 | 0.090 | 0.090 | 0.090 | 0.097 | 0.093 | 0.097 | 0.091 | 0.095 | 0.100 |
P13 | 0.000 | 0.097 | 0.097 | 0.090 | 0.091 | 0.092 | 0.089 | 0.102 | 0.107 | 0.111 | 0.103 | 0.091 |
P14 | 126.121 | 0.000 | 0.092 | 0.091 | 0.094 | 0.088 | 0.089 | 0.236 | 0.094 | 0.107 | 0.114 | 0.091 |
P15 | 62.808 | 43.537 | 0.000 | 0.091 | 0.094 | 0.092 | 0.093 | 0.236 | 0.094 | 0.093 | 0.100 | 0.090 |
P16 | 75.212 | 59.243 | 43.576 | 0.000 | 0.091 | 0.095 | 0.099 | 0.233 | 0.099 | 0.116 | 0.118 | 0.091 |
P17 | 84.077 | 111.518 | 68.878 | 111.545 | 0.000 | 0.096 | 0.090 | 0.232 | 0.100 | 0.115 | 0.095 | 0.094 |
P18 | 257.393 | 185.494 | 199.733 | 185.395 | 247.608 | 0.000 | 0.094 | 0.206 | 0.156 | 0.097 | 0.097 | 0.091 |
P19 | 341.271 | 266.155 | 293.889 | 266.143 | 352.536 | 121.514 | 0.000 | 0.154 | 0.024 | 0.018 | 0.029 | 0.009 |
P20 | 166.455 | 46.169 | 128.776 | 92.379 | 195.463 | 123.627 | 177.363 | 0.000 | 0.018 | 0.017 | 0.028 | 0.008 |
P21 | 437.295 | 352.559 | 446.745 | 404.053 | 510.539 | 441.607 | 381.901 | 355.899 | 0.000 | 0.100 | 0.090 | 0.094 |
P22 | 518.364 | 430.732 | 526.568 | 483.493 | 590.942 | 508.314 | 436.324 | 430.933 | 82.506 | 0.000 | 0.099 | 0.090 |
P23 | 564.382 | 461.774 | 562.455 | 518.883 | 629.691 | 508.818 | 418.347 | 452.369 | 152.414 | 101.020 | 0.000 | 0.096 |
P24 | 131.412 | 20.202 | 97.204 | 58.386 | 165.387 | 146.899 | 211.513 | 34.708 | 368.508 | 443.241 | 475.439 | 0.000 |
Table 6 Geographic distance and Nei’s measures of genetic distance between the different populations
Population | P1 | P2 | P3 | P 4 | P5 | P 6 | P7 | P8 | P9 | P10 | P11 | P12 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
P1 | 0.000 | 0.184 | 0.000 | 0.169 | 0.164 | 1.427 | 0.023 | 0.191 | 0.048 | 0.020 | 1.250 | 1.495 |
P2 | 813.899 | 0.000 | 0.502 | 0.284 | 0.224 | 0.000 | 0.253 | 0.136 | 0.321 | 0.355 | 0.151 | 0.397 |
P3 | 94.239 | 745.562 | 0.000 | 0.134 | 0.238 | 1.499 | 0.087 | 0.624 | 0.010 | 0.079 | 1.559 | 0.914 |
P4 | 200.399 | 764.182 | 121.327 | 0.000 | 0.261 | 0.379 | 0.357 | 0.191 | 0.321 | 0.251 | 0.679 | 0.759 |
P5 | 694.831 | 216.008 | 615.055 | 600.545 | 0.000 | 0.128 | 1.861 | 0.076 | 0.321 | 0.251 | 0.151 | 0.397 |
P6 | 942.630 | 394.233 | 854.178 | 809.441 | 288.084 | 0.000 | 0.594 | 0.220 | 1.261 | 1.101 | 0.100 | 0.317 |
P7 | 94.373 | 717.911 | 58.421 | 174.249 | 600.937 | 851.510 | 0.000 | 1.852 | 1.826 | 0.001 | 1.482 | 1.338 |
P8 | 588.999 | 244.576 | 513.711 | 518.222 | 128.105 | 415.348 | 491.837 | 0.000 | 0.273 | 0.250 | 0.150 | 1.033 |
P9 | 51.623 | 764.833 | 51.287 | 170.344 | 643.819 | 890.660 | 46.619 | 536.283 | 0.000 | 0.011 | 1.826 | 1.624 |
P10 | 105.825 | 719.245 | 28.112 | 130.579 | 595.541 | 937.695 | 43.327 | 491.987 | 56.546 | 0.000 | 1.378 | 1.329 |
P11 | 1102.194 | 295.379 | 1031.610 | 1033.003 | 438.119 | 409.258 | 1006.608 | 518.472 | 1051.834 | 1009.778 | 0.000 | 0.092 |
P12 | 667.923 | 249.735 | 627.351 | 679.819 | 354.799 | 614.673 | 584.291 | 273.074 | 628.524 | 603.785 | 518.927 | 0.000 |
P13 | 658.233 | 215.922 | 610.919 | 655.850 | 306.996 | 569.457 | 570.941 | 227.165 | 615.754 | 587.346 | 496.102 | 47.796 |
P14 | 784.345 | 155.414 | 734.238 | 772.719 | 331.558 | 547.032 | 685.329 | 297.541 | 740.855 | 710.735 | 390.338 | 131.978 |
P15 | 702.516 | 233.378 | 660.920 | 711.379 | 351.351 | 608.949 | 618.035 | 288.427 | 662.272 | 637.127 | 491.349 | 34.232 |
P16 | 731.596 | 193.604 | 686.204 | 730.671 | 337.601 | 576.007 | 645.371 | 280.881 | 690.102 | 662.422 | 447.588 | 32.267 |
P17 | 648.599 | 292.523 | 612.780 | 672.126 | 388.540 | 653.713 | 567.327 | 297.783 | 610.703 | 662.329 | 559.069 | 43.109 |
P18 | 896.381 | 298.413 | 859.041 | 911.302 | 494.726 | 686.210 | 814.512 | 460.657 | 858.245 | 835.246 | 435.728 | 231.839 |
P19 | 997.076 | 302.490 | 952.453 | 995.339 | 516.427 | 659.615 | 911.266 | 511.782 | 955.825 | 928.686 | 348.442 | 328.029 |
P20 | 824.102 | 180.008 | 777.377 | 817.424 | 371.063 | 572.418 | 737.151 | 343.091 | 782.254 | 753.221 | 379.222 | 161.860 |
P21 | 1004.299 | 222.903 | 932.128 | 926.337 | 329.956 | 305.026 | 910.554 | 418.748 | 955.163 | 910.704 | 117.445 | 467.081 |
P22 | 1078.720 | 303.619 | 1003.264 | 992.667 | 391.714 | 308.371 | 984.091 | 492.168 | 1028.344 | 982.642 | 108.409 | 548.314 |
P23 | 1154.471 | 357.847 | 1082.811 | 1077.884 | 477.909 | 401.988 | 1060.605 | 569.301 | 1105.364 | 1061.561 | 73.747 | 588.123 |
P24 | 789.9930 | 174.5340 | 742.3150 | 783.321 | 351.456 | 409.226 | 702.080 | 314.612 | 747.541 | 718.582 | 399.826 | 129.477 |
Population | P13 | P14 | P15 | P16 | P17 | P18 | P19 | P20 | P21 | P22 | P23 | P24 |
P1 | 1.321 | 1.320 | 1.411 | 1.550 | 1.398 | 1.254 | 1.283 | 1.279 | 1.264 | 1.260 | 1.339 | 1.269 |
P2 | 0.353 | 0.147 | 0.376 | 0.514 | 0.315 | 0.547 | 0.540 | 0.184 | 0.081 | 0.087 | 0.103 | 0.208 |
P3 | 1.506 | 1.234 | 1.006 | 0.503 | 1.075 | 1.176 | 0.903 | 0.645 | 0.549 | 0.504 | 0.538 | 0.527 |
P4 | 0.671 | 0.484 | 0.515 | 0.565 | 0.372 | 0.461 | 0.460 | 0.349 | 0.266 | 0.345 | 0.342 | 0.582 |
P5 | 1.321 | 0.670 | 0.716 | 0.565 | 0.996 | 0.893 | 0.789 | 0.338 | 0.166 | 0.139 | 0.136 | 0.423 |
P6 | 0.266 | 0.330 | 0.262 | 0.317 | 0.354 | 0.368 | 0.379 | 0.272 | 0.114 | 0.125 | 0.120 | 0.305 |
P7 | 0.172 | 1.322 | 1.322 | 0.249 | 1.349 | 1.338 | 1.337 | 1.337 | 1.349 | 2.305 | 1.340 | 1.337 |
P8 | 0.668 | 0.725 | 0.080 | 0.564 | 0.514 | 0.526 | 0.553 | 0.191 | 0.135 | 0.063 | 0.128 | 0.289 |
P9 | 2.477 | 1.784 | 2.050 | 1.641 | 1.636 | 2.635 | 2.624 | 1.672 | 1.636 | 1.670 | 1.839 | 0.981 |
P10 | 1.299 | 0.935 | 1.314 | 1.719 | 1.866 | 1.329 | 1.328 | 1.328 | 1.866 | 2.285 | 1.331 | 1.328 |
P11 | 0.100 | 0.103 | 0.096 | 0.092 | 0.093 | 0.097 | 0.123 | 0.138 | 0.156 | 0.087 | 0.093 | 0.092 |
P12 | 0.090 | 0.089 | 0.090 | 0.090 | 0.090 | 0.090 | 0.097 | 0.093 | 0.097 | 0.091 | 0.095 | 0.100 |
P13 | 0.000 | 0.097 | 0.097 | 0.090 | 0.091 | 0.092 | 0.089 | 0.102 | 0.107 | 0.111 | 0.103 | 0.091 |
P14 | 126.121 | 0.000 | 0.092 | 0.091 | 0.094 | 0.088 | 0.089 | 0.236 | 0.094 | 0.107 | 0.114 | 0.091 |
P15 | 62.808 | 43.537 | 0.000 | 0.091 | 0.094 | 0.092 | 0.093 | 0.236 | 0.094 | 0.093 | 0.100 | 0.090 |
P16 | 75.212 | 59.243 | 43.576 | 0.000 | 0.091 | 0.095 | 0.099 | 0.233 | 0.099 | 0.116 | 0.118 | 0.091 |
P17 | 84.077 | 111.518 | 68.878 | 111.545 | 0.000 | 0.096 | 0.090 | 0.232 | 0.100 | 0.115 | 0.095 | 0.094 |
P18 | 257.393 | 185.494 | 199.733 | 185.395 | 247.608 | 0.000 | 0.094 | 0.206 | 0.156 | 0.097 | 0.097 | 0.091 |
P19 | 341.271 | 266.155 | 293.889 | 266.143 | 352.536 | 121.514 | 0.000 | 0.154 | 0.024 | 0.018 | 0.029 | 0.009 |
P20 | 166.455 | 46.169 | 128.776 | 92.379 | 195.463 | 123.627 | 177.363 | 0.000 | 0.018 | 0.017 | 0.028 | 0.008 |
P21 | 437.295 | 352.559 | 446.745 | 404.053 | 510.539 | 441.607 | 381.901 | 355.899 | 0.000 | 0.100 | 0.090 | 0.094 |
P22 | 518.364 | 430.732 | 526.568 | 483.493 | 590.942 | 508.314 | 436.324 | 430.933 | 82.506 | 0.000 | 0.099 | 0.090 |
P23 | 564.382 | 461.774 | 562.455 | 518.883 | 629.691 | 508.818 | 418.347 | 452.369 | 152.414 | 101.020 | 0.000 | 0.096 |
P24 | 131.412 | 20.202 | 97.204 | 58.386 | 165.387 | 146.899 | 211.513 | 34.708 | 368.508 | 443.241 | 475.439 | 0.000 |
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[1] | WANG Yang, ZHU Shengjie, LI Jie, HE Xiuling, JIANG Xiongbo, ZHANG Min. Species Abundance Distribution Patterns of a Toona ciliata Community in Xingdoushan Nature Reserve [J]. Journal of Resources and Ecology, 2019, 10(5): 494-503. |
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